Pairwise Alignments

Query, 158 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 19/145 (13%)

Query: 5   NIICVDDQREVLSAVLQDLEP--LSRW-INIEDCESADEALELMDDLDAQGEWVAVVISD 61
           +I+ VDD+  +L AV ++L+   L R+   +       +AL     + A+ +    VISD
Sbjct: 11  HILVVDDELSILHAVERELKGRRLGRYAFTVAGFTDPRQAL-----VAAERQTFDAVISD 65

Query: 62  HVMPGKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSAKIL 121
             MPG  G+E L  ++A        +++L+GQ      +  +N   I+ +  KPW A +L
Sbjct: 66  FRMPGMDGLEFLKALAAIQP--DCPRLVLSGQTDMDSLVRMVNETHIYRFIAKPWPAYML 123

Query: 122 VDCVRSLVTHYVFDQRLDYTEWQSE 146
                         Q +DY E  +E
Sbjct: 124 ---------QAALAQAIDYAETLAE 139



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 58  VISDHVMPGKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWS 117
           +I+D+ MP  +G+ELL   +A  R     ++L++GQ    +   AI  A I  + +KPWS
Sbjct: 236 IIADYRMPEMNGIELLQRFAA--RQPDCSRILISGQIGEAELAQAIQQAHIFAFVEKPWS 293