Pairwise Alignments

Query, 158 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 11/133 (8%)

Query: 6   IICVDDQREVLSAVLQDLEPLSRWINIEDCESADEALELMDDLDAQGEWVAVVISDHVMP 65
           ++ VDD+  +L+A+ ++    S    +    S +EAL ++ D D Q     V++SD+ MP
Sbjct: 12  LLLVDDEPALLNALKREFR--SAPYEVLTATSGEEALAVLADRDVQ-----VILSDYRMP 64

Query: 66  GKSGVELLSEISA-DPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSAKILVDC 124
           G SGVE L++  A  P  +   +++L+G A     I AIN   I+ + +KPW  + L   
Sbjct: 65  GMSGVEFLAQARALRPDAV---RMVLSGYADIGAVIAAINQGNIYKFLNKPWDGEELRAV 121

Query: 125 VRSLVTHYVFDQR 137
                 H+   +R
Sbjct: 122 TAQAFAHHALVRR 134