Pairwise Alignments

Query, 158 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 21/159 (13%)

Query: 6   IICVDDQREVLSAVLQDLEPLSRWINIEDCESADEALELMDDLDAQGEWVAVVISDHVMP 65
           I+CVDD+  +L + LQ L  + + + I   +S  +ALELM +       V V+I+D  MP
Sbjct: 12  ILCVDDEASILKS-LQRLF-IGKDLQILLADSGSKALELMLE-----HRVNVIITDMRMP 64

Query: 66  GKSGVELLSEISADPRFIHTKKVLLTGQATHTDTINAINTAGIHHYFDKPWSAKILVDCV 125
             +G E L++ +      +  ++L+TG A    T++AIN   IH Y  KPW  + L+  V
Sbjct: 65  NMTGAEFLAKAAILQPDAY--RILMTGYADLASTVSAINLGKIHRYVQKPWDNQELLTVV 122

Query: 126 ------------RSLVTHYVFDQRLDYTEWQSELDNTIV 152
                          +T  V  Q     E  S L+ T++
Sbjct: 123 DEGLALCHLIRQNKQLTAKVATQNKQLKELNSSLEETVL 161