Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., alpha-ketoglutarate sensor protein (mifS) (from data) from Pseudomonas stutzeri RCH2

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 243 AHWLKNPHLAIRYW--------QMGRDLHDLRLAAKHSVGIVKSVKQLG--------RAD 286
           AH +  P  A+R            GRD  ++R    H  G+++ +  L         ++ 
Sbjct: 372 AHEINQPLTALRMQLASLRLLLDSGRD-GEVREGLGHVEGLLERMAALTGHLKTFARKSP 430

Query: 287 IRLDEEVDLNSTINRALALLQSDLR--RVSVRMRPGSLPIIKGSQTEWVQVWINLIKNAC 344
             L + + L   + +AL LL   +R  +V V  +  +  ++ G      QV INL+ NA 
Sbjct: 431 AGLRQRLSLAEVLEQALQLLSPRIRSEQVEVFRQVPAEAMVSGDAIRLEQVLINLLHNAL 490

Query: 345 DAMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLG 404
           DAMA   +  + I  + +     ++V +NG  I      ++F+P FTTK  G   GLGLG
Sbjct: 491 DAMAGRPQRRLRILCQLNGDSWQLSVGDNGGGIASEHLDQVFEPFFTTKPVGQ--GLGLG 548

Query: 405 LAIVKRIVSGYGGTVAVKSDQDKTIFRIK-LPVEGYHGE 442
           LA+   IV   GGT+ V +D    +F +  L VEG+  E
Sbjct: 549 LAVSYGIVRDMGGTLEVSNDAHGAVFTLTLLAVEGHAAE 587



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 139 ALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEAL 180
           A + L  A +M  LGQ++A +AHE+N  +  +  +   L  L
Sbjct: 351 AQDELVHAARMAALGQMSAALAHEINQPLTALRMQLASLRLL 392