Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 72.0 bits (175), Expect = 5e-17
 Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 43/300 (14%)

Query: 141 ERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEALFMELLEEVHPEASQFFDFGL 200
           E +  +E+M ++G LAAG+AHE+NN +G +    + +       LE  + EA++  + G+
Sbjct: 402 EMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELER-NREAAE--ETGV 458

Query: 201 LFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPANELSAHWLKNPHLAIRYWQMGR 260
                    + RE   + +   Q     A+ ++  +  + +S   L + HL +       
Sbjct: 459 RLEAVNQYLQRREVPQLLDGIQQAGSRAAKIVSHMLSFSRMSNRQLADCHLPV------- 511

Query: 261 DLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNSTINRALALLQSDLRRVSVRMRPG 320
                         ++    ++   D  L E  D      +A+ +++    RV       
Sbjct: 512 --------------LIDQALEIAGNDFALMEGFDF-----KAIDIVRDFDPRVD------ 546

Query: 321 SLPIIKGSQTEWVQVWINLIKNACDAMA--QTTEP-TIDIQTRCSRQRLYVTVANNGPEI 377
            +P I G++ E  QV +NL+KNA  A+   Q  EP  I ++TR +     + V +NG  I
Sbjct: 547 RVPCI-GNELE--QVLLNLLKNAAQAIHAHQVGEPGQIILRTRLNPPWAEIQVEDNGGGI 603

Query: 378 DEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYGGTVAVKSDQDK-TIFRIKLPV 436
            E  R++IF+P FTTK+ G   GLGL ++    I + + G + V+      T F ++LP+
Sbjct: 604 PENVRKRIFEPFFTTKEVGQGTGLGLSVSYF-IITNNHQGQMEVQCQPGHGTTFTLRLPL 662