Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1186 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 73.6 bits (179), Expect = 3e-17
 Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 54/326 (16%)

Query: 119  VAELSQRQRRATQEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLE 178
            +A LS R   A +EA  +  AL+    A ++ ++GQLAAGIAHE+N  I  +      +E
Sbjct: 903  IAVLSFRSIDALKEA--QREALQ----ASRLASVGQLAAGIAHEINTPIQYIGDNLRFIE 956

Query: 179  ALFMELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPA 238
                EL            D   L  +    +EA    A         KDIA         
Sbjct: 957  GALGEL-------GGVLADLRALAARGGLEAEADGCFAA--------KDIA--------- 992

Query: 239  NELSAHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNST 298
                 + ++   LA      G D         H   IV+S+K+            D+N  
Sbjct: 993  -----YLMEELPLAATQSLQGVD---------HVAHIVRSMKEFSHPGTTAKVATDINRA 1038

Query: 299  INRALALLQSDLRRVSVRMRP--GSLPIIKGSQTEWVQVWINLIKNACDAM----AQTTE 352
            I+  L + +++ ++++         LP+I     E  QV +NLI NA  A+    A+   
Sbjct: 1039 IDSTLTVSRNEWKQLAQVETDLDDDLPLILCFAAEINQVLLNLIVNAAHAIETVRAEGQL 1098

Query: 353  PTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKR-I 411
             TI I TR   + + + + ++GP +  A R KIF P FTTK  G   G G GL+I +  +
Sbjct: 1099 GTIRIATRGEAECIEIRITDSGPGVPPAIRDKIFDPFFTTKSVGK--GTGQGLSICRDVV 1156

Query: 412  VSGYGGTVAV-KSDQDKTIFRIKLPV 436
            V+ +GG + +  S      F ++LP+
Sbjct: 1157 VTKHGGKMYLDTSVAPGACFVVRLPI 1182