Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 55/301 (18%)

Query: 131 QEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEALFMELLEEVHP 190
           +E+  + +  +    A ++ +LG+L+AGIAHE+NN  G++        +LF   +++++P
Sbjct: 392 EESTEQHKLRQANEEASRLASLGELSAGIAHEINNPTGLILHAI----SLFSAAIKDLNP 447

Query: 191 EASQFFD---FGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPANELSAHWLK 247
            A+ +     F  + G  ++ S+A E  AV     +   + A+ ++R V  N+L  + L 
Sbjct: 448 AANYYQQQNPFWQIAG--LAPSQAMEEMAVSSDTIE---EAAKRISRIV--NDLKRYALP 500

Query: 248 NPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNSTINRALALLQ 307
           N                  L   H++  +  V            EV L  T N      Q
Sbjct: 501 N------------------LTQDHTLVCLNEVV-----------EVALRLTAN------Q 525

Query: 308 SDLRRVSVRMRPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTEPTIDIQTRCSRQRLY 367
           +  R+V+  +   S P I G   +  QV INLI+NAC A A   E +I I T+ S+ R  
Sbjct: 526 TKTRQVTKLLHLPS-PRIMGDAQQLHQVLINLIQNACHACA-AHEGSIQISTQVSQGRAL 583

Query: 368 VTVANNGPEIDEATRRKIFQPSFTTKK-EGLSFGLGLGLAIVKRIVSGYGGTVAVKSDQD 426
           + V +NG  +D AT ++I +P FTT++ EG   G GLGL++  RI+  + G + + S   
Sbjct: 584 IKVNDNGCGMDSATLKRITEPFFTTRRTEG---GSGLGLSVCSRIIKEHQGQMQIHSAPG 640

Query: 427 K 427
           K
Sbjct: 641 K 641