Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 19/216 (8%)

Query: 217 VFEKQYQLPKDIARELARAVPANELSAHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVGIV 276
           +FE+Q Q  +   R L     A+ + AH L  P   IRY   G     L    +    + 
Sbjct: 324 LFEQQQQFYR-AQRVLLTGEMASGI-AHELNQPLAGIRYLAQGSIYRLLAQQTELQHALS 381

Query: 277 KSVKQLGRADIRLD------------EEVDLNSTINRALALLQSDLRRVSVRMRPGSLPI 324
           K ++Q+ RA   +             ++ DL   I   L L+Q D +R+    +    P+
Sbjct: 382 KILQQVDRAQNTIKRFRQFCQQPSVYQDCDLKELIQDTLNLMQPDFKRIDFNPKLFLWPL 441

Query: 325 IKGSQTEWVQ-VWINLIKNACDAMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRR 383
                   +Q V++NLI+NA DAM +T +P + I      +   + V+++G  + E    
Sbjct: 442 TVTLDISLMQQVFVNLIRNALDAMDETDDPQLAIAITNDSENAVIVVSDSGIGLSEQALE 501

Query: 384 KIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYGGTV 419
           ++F P  T+K      GLGLG+ + KRIV  +GG +
Sbjct: 502 RLFFPFETSKAN----GLGLGMVVCKRIVEEHGGKI 533



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 2/42 (4%)

Query: 126 QRRATQEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAI 167
           Q + TQ+ + +++  ++ Y A+++   G++A+GIAHELN  +
Sbjct: 316 QHKNTQKRLFEQQ--QQFYRAQRVLLTGEMASGIAHELNQPL 355