Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 88.6 bits (218), Expect = 9e-22
 Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 52/333 (15%)

Query: 118 IVAELSQRQR--RATQEAVAKERALER--------LYSAEQMTTLGQLAAGIAHELNNAI 167
           +V ++  R+R  +  Q+A+A+ +AL +        L  +E+M ++GQLAAG+AHE+NN I
Sbjct: 704 VVRDIDGRKRAEQELQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPI 763

Query: 168 GVVSSKTERLEALFMELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEKQYQ-LPK 226
           G V S    L+    E+   +   A +  D G     +   S    R    EK +  L  
Sbjct: 764 GFVYSNLGTLDHYLREIFAII--AAYEAADSGPCRDCRQLES---ARQLKLEKDFDFLRS 818

Query: 227 DIARELARAVPANELSAHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRAD 286
           DI + LA +                        RD   L   AK    I + +K   RA 
Sbjct: 819 DIVQLLAES------------------------RD--GLERVAK----IARDLKDFSRAG 848

Query: 287 IRLDEEVDLNSTINRALALLQSDLR-RVSVRMRPGSLPIIKGSQTEWVQVWINLIKNACD 345
               +  DL+  ++  L ++ ++L+ + +V    G LP++    ++  QV++NL+ NA  
Sbjct: 849 EAESQWADLHQGLDSTLNIVWNELKYKCTVHKEYGELPLVWCEPSQINQVFMNLLVNAAQ 908

Query: 346 AMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGL 405
           A+ +  +  I ++T      ++V V+++G  I      ++F+P FTTK  G   G GLGL
Sbjct: 909 AIPKKGD--IWLRTGRRGDEVFVAVSDSGCGIAPEYLHRLFEPFFTTKPVGK--GTGLGL 964

Query: 406 AIVKRIVSGYGGTVAVKSDQDK-TIFRIKLPVE 437
           ++   IV  + G + V+S+  + + F + LP+E
Sbjct: 965 SLAYSIVQKHQGRLEVESEPGRGSTFTVWLPIE 997