Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 91.3 bits (225), Expect = 1e-22
 Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 49/325 (15%)

Query: 121 ELSQRQRRATQEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEAL 180
           EL QR     +     + A E+L  +E+M ++GQLAAG+AHE+NN IG V S    L   
Sbjct: 443 ELRQRNAELLEVNKRLQEAQEQLVQSEKMASIGQLAAGVAHEINNPIGYVQSNLSTLGRY 502

Query: 181 FMELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPANE 240
             ++                   Q V  S A           QLP +     A A    +
Sbjct: 503 LEDM-------------------QTVLDSLATAVA-------QLPSEHPAAQAVARVKQD 536

Query: 241 LSAHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVG----IVKSVKQLGRADIRLDEE-VDL 295
           L   +L              DL  L   ++  +     IV  +K   R D   D +  DL
Sbjct: 537 LDFDFLLE------------DLPSLVTQSRDGIDRVRKIVADLKDFSRLDASQDWQWADL 584

Query: 296 NSTINRALALLQSDLR-RVSVRMRPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTEPT 354
           +  ++  L ++ ++++ R  V    G LP ++   ++  QV++NL+ N+  AM +     
Sbjct: 585 HQGLDSTLNIVNNEIKYRAEVVREYGQLPEVECLPSQLNQVFLNLLVNSAHAMPEGQMGR 644

Query: 355 IDIQTRCSR--QRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIV 412
           I +++       ++++ V +NG  I      ++F P FTTK  G   G GLGL++   IV
Sbjct: 645 ITLRSGHDEPAHQVWLEVEDNGSGISPENMHRLFDPFFTTKPVGK--GTGLGLSLSYGIV 702

Query: 413 SGYGGTVAVKSDQDK-TIFRIKLPV 436
             + G + V S+  K T FRI LPV
Sbjct: 703 QKHHGQITVSSELGKGTTFRIVLPV 727