Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 70.5 bits (171), Expect = 9e-17
 Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 30/217 (13%)

Query: 243 AHWLKNP--HLAIRYWQMGRDL----------HDLRLAA---KHSVGIVKSVKQLGRADI 287
           AH ++NP   + +R + + R L           D  + A   +H   IV +  +  R   
Sbjct: 152 AHSIRNPLTSVKLRLFALERSLKLGPDQKEQQEDFEVIAAEIRHLDAIVTNFLEFSRRPR 211

Query: 288 RLDEEVDLNSTINRALALLQSDLRRVSVRM---RPGSLPIIKGSQTEWVQVWINLIKNAC 344
              + V  +  ++  L LL+  L   +V +   R   LP++ G   +  +  +NLI NAC
Sbjct: 212 LRMQPVSPSDVVDMTLQLLKHRLESFNVAVAVHRAERLPVVDGDAEQLKEALVNLILNAC 271

Query: 345 DAMAQTTEPTIDIQTRCS-----RQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSF 399
           +AM    + T+DI           + + + +A++GP + +  R ++FQP F+TK+E    
Sbjct: 272 EAMGY--DGTLDITEEKGIINPLGRAVVIRIADSGPGVPQHIREEVFQPFFSTKEE---- 325

Query: 400 GLGLGLAIVKRIVSGYGGTVAVKSDQDK-TIFRIKLP 435
           G GLGL I +RI   +GG + + S   K   F I LP
Sbjct: 326 GTGLGLPIARRIFEEHGGWLHLHSAHGKGATFVIVLP 362



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 134 VAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLE 178
           V  E + E L   E++  +G+LAAG+AH + N +  V  +   LE
Sbjct: 126 VQLEESHETLRQTEKLALVGKLAAGVAHSIRNPLTSVKLRLFALE 170