Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 61/310 (19%)

Query: 135 AKERALERLYSAE-QMTTLGQLAAGIAHELNNAIGVVSSKTERLEALFMEL---LEEV-- 188
           A+++ +E+  + + ++  +GQLAAG+AHELNN +G + S     E    ++   L EV  
Sbjct: 195 AQQKRIEQSMARQGKLAAIGQLAAGVAHELNNPLGFIYSNLNTFELYLKDINTFLMEVCN 254

Query: 189 -HPEASQFFD-FGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPANELSAHWL 246
            HP A + ++   L F  K SS    E  A   +     +DI + L      +E +    
Sbjct: 255 SHPNAIKLYNKHNLDFILKDSSELINESLAGARRA----RDIIKNLRNFSHPDENT---- 306

Query: 247 KNPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNSTINRALALL 306
                               ++  + + ++    ++    ++    + +N  ++ A    
Sbjct: 307 --------------------ISTINILELITDTVRIANTQVKKHARIKINHDLHHAFT-- 344

Query: 307 QSDLRRVSVRMRPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTEPTIDIQTRCSRQRL 366
                              +G+ T+  QV +NLI NA  ++       I+I        +
Sbjct: 345 -------------------QGNATQLSQVILNLINNAHHSIKHQ-HGLIEISINKFNNWI 384

Query: 367 YVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYGGTVA-VKSDQ 425
            + + +NG  ID+     IF+P FTTK+ G   G GLGL+I + I+  + G +A V +  
Sbjct: 385 NIEIEDNGCGIDDTDIPHIFEPFFTTKEIGQ--GTGLGLSISRAIIEQHNGCIALVHTGL 442

Query: 426 DKTIFRIKLP 435
             T F I LP
Sbjct: 443 KGTKFVISLP 452