Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 26/254 (10%)

Query: 206 VSSSEARERGAVFEKQYQLPK---DIARELARAVPANELSA---HWLKNP------HLAI 253
           ++ +  R R  V+ ++    K   D  R+  +      L+A   H + NP      +  +
Sbjct: 546 LAQTHGRNRSVVYLRETTREKRMFDQMRQQEKLASVGRLAAGLAHEINNPLGVIMCYAEL 605

Query: 254 RYWQMG--RDLHDLRLAAKHSVG---IVKSVKQLGRADIRLDEEVDLNSTINRALALLQS 308
              Q+G  +  HDL +  +H++    +V+ +    R      E  D+N  ++  + +   
Sbjct: 606 LQTQVGDSQARHDLDIILRHTLQAQRVVRDLLDFARPKDTRCEACDINDVLSDIVEIFMP 665

Query: 309 DLRR----VSVRMRPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTEPTIDIQTRCSRQ 364
             R+    VS+ + P  LP +   +    QV+ NL+ NA DA+ + T  TI I T     
Sbjct: 666 KARKSGVNVSLDLEP-DLPRVYADRDSLGQVFSNLLLNALDAVPERTG-TIAISTCGKGY 723

Query: 365 RLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYGGTVAVKSD 424
            + VT+ +NGP I EA R +IF P +TTK+ G   G GLGLA+V  I+    G + V +D
Sbjct: 724 GVTVTIRDNGPGIPEAHRDRIFDPFYTTKETGR--GTGLGLAVVYGIMRDLNGNIDVSTD 781

Query: 425 QDKTIFRIKLPVEG 438
            D   F +  P +G
Sbjct: 782 -DGATFILHFPADG 794



 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 17/48 (35%), Positives = 33/48 (68%)

Query: 131 QEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLE 178
           +E   ++R  +++   E++ ++G+LAAG+AHE+NN +GV+    E L+
Sbjct: 560 RETTREKRMFDQMRQQEKLASVGRLAAGLAHEINNPLGVIMCYAELLQ 607