Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 93/343 (27%), Positives = 144/343 (41%), Gaps = 80/343 (23%)

Query: 114 FMPVIVAELSQRQRRATQEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSK 173
           F P   AE  Q   R   +   + R    +   E+M +LG LAAG+AHE+NN + V+   
Sbjct: 265 FYPAATAEGRQLVVRI-DDVTDRVRMESLMLQTEKMLSLGGLAAGMAHEINNPLAVILQG 323

Query: 174 TERLEALFMELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELA 233
            + ++                                                   R LA
Sbjct: 324 ADTVQ---------------------------------------------------RRLA 332

Query: 234 RAVPANELSAHW----LKNPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRL 289
             +PAN   A      L   H  +   ++ R +  +  A + +  IV+++   GR D   
Sbjct: 333 PGLPANRDIAREIGLDLDLMHTYLERRKLPRFIAGIAEAGRRAADIVENMLSFGRGDEGR 392

Query: 290 DEEVDLNSTINRALALL--------QSDLRRVS-VRMRPGSLPIIKGSQTEWVQVWINLI 340
              +D+N  + RAL L         + D R++  V+     +P I  +  E  QV  NL+
Sbjct: 393 RCAIDINKVVERALELAAHHYDLKKKYDFRQILIVKDLAEGMPSIVCNPIEMEQVLFNLL 452

Query: 341 KNAC----DAMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEG 396
           +NA     +A  Q   PTI +QTRC  + L + V +NGP +     R+IF+P FTTK  G
Sbjct: 453 QNAAQVLYEAPPQDARPTIHLQTRCVGRLLEIRVTDNGPGVPHELARRIFEPFFTTKPPG 512

Query: 397 LSFGLGLGLAIVKRIVS-GYGGTVAVKSDQDKTIFRIKLPVEG 438
           +  G GLGL++   IVS  +GGT+ ++        R++LP  G
Sbjct: 513 M--GTGLGLSVSYFIVSEHHGGTLRLE--------RLRLPEHG 545