Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 12/181 (6%)

Query: 275 IVKSVKQLGRADIRLDEEVDLNSTINRALALLQS--DLRRVSVRMR-PGSLPIIKGSQTE 331
           I++S+    R       + DLN  + + L L+    D RR++  +     LP ++G    
Sbjct: 324 ILRSILNFARPTTSKAGKADLNGVVRQTLELMAFGFDTRRITSELALAADLPRVRGDAEL 383

Query: 332 WVQVWINLIKNACDAMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFT 391
             Q  INL+KNA +AM       + ++T  +   ++VTV ++G  I      +IF P F+
Sbjct: 384 IKQCLINLVKNAQEAMPGGG--VLTVRTGMTHSHVFVTVEDSGEGIPAEMHERIFSPFFS 441

Query: 392 TKKEGLSFGLGLGLAIVKRIVSGYGGTVAVKSDQDK-TIFRIKLP--VEGYHGETEHHLR 448
           TK++    G G+GLA+ ++IV   GG V + S   K T   + LP  +    GET  H  
Sbjct: 442 TKEK----GAGIGLAMTRKIVEDMGGKVDLVSHVGKGTRITLFLPPVLAVPEGETPPHAN 497

Query: 449 G 449
           G
Sbjct: 498 G 498



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 142 RLYSAEQMTTLGQLAAGIAHELNN---AIGVVSSKTERLEAL 180
           RL  +E++  +G+LA  IAHE+ N   AIG  ++   RL  L
Sbjct: 262 RLQQSEKLAAIGELATYIAHEIRNPLFAIGGFANSLLRLPTL 303