Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 89/324 (27%), Positives = 140/324 (43%), Gaps = 68/324 (20%)

Query: 131 QEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEALFMELLEEVHP 190
           ++   + R  E +   E+M ++G +AAG+AHE+NN +  ++   + +E            
Sbjct: 260 RDVTEQHRMRELMIQTEKMHSVGGVAAGMAHEINNPLSAIAQAAQNIER----------- 308

Query: 191 EASQFFDFGLLFGQKVSSSEARERGAVFEKQYQLPKDIAREL-ARAVPANELSAHWLKNP 249
                                           +L  D+A  + A +V   +L A  L+N 
Sbjct: 309 --------------------------------RLATDLAGNIKAASVTGMDLEA--LRN- 333

Query: 250 HLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNSTINRALALLQSD 309
           +L  R   M   L  +R A   +  IV+++    R         D+ + I +ALAL  +D
Sbjct: 334 YLEARGVPML--LGHIRDACARAATIVRNMLDFSRRSDSSRTTCDIEAIIRKALALADND 391

Query: 310 --------LRRVSVRMR-PGSLPIIKGSQTEWVQVWINLIKNACDAMA------QTTEPT 354
                    R + +    P  LP I    TE  QV  NL+KNA +A A      +  +P 
Sbjct: 392 YDLRKHHDFRSIHISFDCPDDLPTITCVPTELEQVIFNLLKNASEAFADIDATDRREDPA 451

Query: 355 IDIQ--TRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIV 412
           I I   T  S   L + +++NGP + EA RR++F+P FTTK  G   GLGL ++    I 
Sbjct: 452 IHIAVTTEESYDGLRLAISDNGPGMHEALRRRVFEPFFTTKPPGKGTGLGLSVSYF-IIT 510

Query: 413 SGYGGTVAVKSDQDK-TIFRIKLP 435
             +GG + V+S     T F I+LP
Sbjct: 511 QNHGGEMWVESQPGAGTTFVIRLP 534