Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., Di- and tricarboxylate transporters from Pseudomonas stutzeri RCH2

 Score = 54.7 bits (130), Expect = 9e-12
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 15/154 (9%)

Query: 335 KMISWDVLWLVSGGIALGLALDKTGLAELVVHSIP--FDQYSPYVVILGAAILCLLMANF 392
           K I W  L L+ G +   LAL KTG   L    +        P+ ++    +L  L+  F
Sbjct: 461 KAIHWQSLILIVGMLPFALALQKTGGIALATSGLVGLLGDAGPHALLACLFLLTALIGLF 520

Query: 393 MSHTATANLLMPIMAA----LGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNAL 448
           +S+TATA L+ P+  +    LGAS  P           ++V  AAS     PIS P N L
Sbjct: 521 ISNTATAVLMAPVALSTAEQLGASPYPF---------AMIVALAASAAFMTPISLPVNTL 571

Query: 449 AHATRNVQSQQMAKVGIILGIFGVLMSFVMVWIL 482
                  +     ++G+   +  + +S  +V +L
Sbjct: 572 VLGPGQYRFADFVRIGVPFTLLVMAVSVALVPLL 605



 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 156 PKYVMLGLMMITAVFSMFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIG 215
           P  ++  L ++TA+  +F+SNTAT  +M  +        G        FA+ + +AA+  
Sbjct: 503 PHALLACLFLLTALIGLFISNTATAVLMAPVALSTAEQLGASP---YPFAMIVALAAS-A 558

Query: 216 GIGTPIGTPPNAIALKYLVGDNLITFAEWMAFGIPFVVILMALAWLLIEFMY 267
              TPI  P N + L    G     FA+++  G+PF +++MA++  L+  ++
Sbjct: 559 AFMTPISLPVNTLVL----GPGQYRFADFVRIGVPFTLLVMAVSVALVPLLF 606