Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., SLC13 family permease from Methanococcus maripaludis JJ

 Score =  127 bits (319), Expect = 8e-34
 Identities = 112/435 (25%), Positives = 201/435 (46%), Gaps = 34/435 (7%)

Query: 51  QQRVIAIFLL--AALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALL 108
           Q+ +I + +L  AA+L+  E +P+  T++++ V     LS  G               +L
Sbjct: 34  QKAIITLIILGTAAVLFFTEALPLPVTAMLVPVA----LSFPGI-------------DIL 76

Query: 109 KSTEIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITA 168
            S+   A F N  ++LF+  F L  A  +      + ++ +K  G +   +ML +M+   
Sbjct: 77  SSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIG 136

Query: 169 VFSMFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAI 228
             S F+SNT TTA  + I+   I V     PG++   +    AA++GG  T IGTPPN +
Sbjct: 137 TMSAFLSNTGTTAAFIPIVMG-ICVSASLKPGKLLIPMAY--AASLGGTLTLIGTPPNGL 193

Query: 229 ALKYLVGDNLITFA--EWMAFGIP-FVVILMALAWLLIEFMYRAEQKTIELTIKGKFLKT 285
               L    +  F   E+   GI  F+V ++    +  + +  ++ K  +        +T
Sbjct: 194 VNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAKAKDFVSDTLKYRT 253

Query: 286 PKAIIVYITFASTILLWMLGSLHGMNSYSVALIPVAVFSVTGIIG-KEDLKMISWDVLWL 344
            K  I  + F   +L+   G++  + ++ +    V +   TG I  +E    ISW  ++L
Sbjct: 254 NKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVM---TGCITMQEAFNSISWTTIFL 310

Query: 345 VSGGIALGLALDKTGLAELVVHSIPFDQYSPYVVILGAAILCLLMANFMSHTATANLLMP 404
            +G + LG A+  TG A ++ +++    +SP  ++  A +L  L+   MS+TATA L+MP
Sbjct: 311 FAGMLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYVLTALITEVMSNTATAALVMP 370

Query: 405 IMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHATRNVQSQQMAKVG 464
           +  AL  +            +++ +  AAS     PI+TPPN +         +  AK G
Sbjct: 371 LGIALADAFDV-----SAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSG 425

Query: 465 IILGIFGVLMSFVMV 479
             L I   +++  ++
Sbjct: 426 WPLEILCAVVAIAVI 440