Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., transcriptional regulator from Klebsiella michiganensis M5al

 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 7/150 (4%)

Query: 335 KMISWDVLWLVSGGIALGLALDKTGLAELVVHSIP--FDQYSPYVVILGAAILCLLMANF 392
           K I W  + L+ G +   LAL KTG  +LVV  +        PY+++    ++C  +  F
Sbjct: 463 KAIHWPSIILIVGMMPFALALQKTGGVDLVVQGLMDVAGSKGPYLMLGCLFVMCAAIGLF 522

Query: 393 MSHTATANLLMPIMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHAT 452
           +S+TATA L+ PI  A   SM  ++P        +VV  AAS     P+S+P N L    
Sbjct: 523 ISNTATAVLMAPIALAAAKSM-GVSP----YPFAMVVAMAASAAFMTPVSSPVNTLVLGP 577

Query: 453 RNVQSQQMAKVGIILGIFGVLMSFVMVWIL 482
                    K+G+   I  +++  +++ +L
Sbjct: 578 GKYSFSDFVKIGVPFTILVMVVCVLLIPVL 607



 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 120 PIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLG-LMMITAVFSMFMSNTA 178
           P I+L +G    A+A  K      + + L+   G+   Y+MLG L ++ A   +F+SNTA
Sbjct: 468 PSIILIVGMMPFALALQKTGGVDLVVQGLMDVAGSKGPYLMLGCLFVMCAAIGLFISNTA 527

Query: 179 TTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYLVGDNL 238
           T  +M  I        G        FA+ + +AA+   + TP+ +P N + L    G   
Sbjct: 528 TAVLMAPIALAAAKSMGVSP---YPFAMVVAMAASAAFM-TPVSSPVNTLVL----GPGK 579

Query: 239 ITFAEWMAFGIPFVVILMALAWLLIEFMY 267
            +F++++  G+PF +++M +  LLI  ++
Sbjct: 580 YSFSDFVKIGVPFTILVMVVCVLLIPVLF 608



 Score = 54.7 bits (130), Expect = 9e-12
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 21/214 (9%)

Query: 59  LLAALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALLKSTEIMATFA 118
           LLA  + +F    +   ++ ++V+   +LS           GT      L  +E  + F+
Sbjct: 11  LLAVAVVLFATGKVRMDAIALLVIVAFVLS-----------GT------LTLSEAFSGFS 53

Query: 119 NPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITAVFSMFMSNTA 178
           +P ++L    F +     +  +   +   L+K  GN+   +++ LM+  A    FMS+T 
Sbjct: 54  DPNVILIAALFIIGDGLVRTGVATKMGSWLVKVAGNSETKMLVYLMLTVAGLGAFMSSTG 113

Query: 179 TTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYLVGDNL 238
             A+ + ++  V ++     P R+   L    A  I G+ T + TPPN +    L+ + L
Sbjct: 114 VVAIFIPVVLSV-SMRMNTSPSRLMMPLSF--AGLISGMMTLVATPPNLVVNSELLREGL 170

Query: 239 ITFAEWMAFGIPFVVILMALAWLLI-EFMYRAEQ 271
             F+ +    I  VV+++ + ++L+  FM + ++
Sbjct: 171 QGFSFFSVTPIGLVVLVLGVFYMLVMRFMLKGDE 204