Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., putative Na+/sulphate transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.1 bits (183), Expect = 6e-18
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 335 KMISWDVLWLVSGGIALGLALDKTGLAELVVHSIP--FDQYSPYVVILGAAILCLLMANF 392
           K I+W+ + L++  + + LAL+KTG +E + +++      Y P  ++ G      LM  F
Sbjct: 472 KTINWESIVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIALMAGIYFTTSLMTMF 531

Query: 393 MSHTATANLLMPIMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHAT 452
           +S+TATA LL PI A   A    ++P    V  +  VT  AS+  + P STPPNAL    
Sbjct: 532 ISNTATAVLLAPI-ALQSAMQIGVSP----VPFLFAVTVGASMCFASPFSTPPNALVMPA 586

Query: 453 RNVQSQQMAKVGIILGIFGVLMSFVMVWILNMV 485
                    KVG+ L I   +M  VM+ +L ++
Sbjct: 587 GQYTFMDYIKVGLPLQI---IMGIVMILVLPLI 616



 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 10/163 (6%)

Query: 107 LLKSTEIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMI 166
           +L   E ++ F+N ++++ +G F +  A  +  L   ++  +LK  GN+   +   +M++
Sbjct: 38  ILTPDEALSGFSNSVVIMMIGLFVVGGAIFQTGLAKMISSRILKLAGNSEIRLFFLVMLV 97

Query: 167 TAVFSMFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPN 226
           T+    F+SNT T A+ML I+   +A+    +P R+   L    A+++GG+ T IGTPPN
Sbjct: 98  TSAIGAFVSNTGTVALMLPIVVS-LAMSAKMNPSRLLMPLAF--ASSMGGMMTLIGTPPN 154

Query: 227 AIALKYL--VGDNLITFAEWMAFGIPFV----VILMALA-WLL 262
            +    L   G   ++F  ++  G+  V    ++LM L+ W L
Sbjct: 155 LVIQNTLTSAGFEPLSFFTFLPVGLVSVAVGTLVLMPLSKWFL 197



 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 25/213 (11%)

Query: 56  AIFLLAALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALLKSTEIMA 115
           AI +L   + VF+ IP+   + V+I   +++L+                G          
Sbjct: 429 AIMVLMVAMMVFDFIPVAPVTAVMIAGILMVLT----------------GCFRNVEAAYK 472

Query: 116 TFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGN-NPKYVMLGLMMITAVFSMFM 174
           T     I+L      +++A  K      ++  L+   G+  P  +M G+   T++ +MF+
Sbjct: 473 TINWESIVLIAAMLPMSLALEKTGASEYISNTLVSGLGSYGPIALMAGIYFTTSLMTMFI 532

Query: 175 SNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYLV 234
           SNTAT  ++  I        G      V F   + V A++    +P  TPPNA+ +    
Sbjct: 533 SNTATAVLLAPIALQSAMQIGVSP---VPFLFAVTVGASM-CFASPFSTPPNALVMP--- 585

Query: 235 GDNLITFAEWMAFGIPFVVILMALAWLLIEFMY 267
                TF +++  G+P  +I+  +  L++  ++
Sbjct: 586 -AGQYTFMDYIKVGLPLQIIMGIVMILVLPLIF 617



 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 289 IIVYITFASTILLWMLGSLHGMNSYSVALIPVAVFSVTGIIGKEDLKMISWDVLWLVSGG 348
           +I  I    + + ++ G +        AL+ + +F +  +   E L   S  V+ ++ G 
Sbjct: 2   LITIIILVLSAIFFVNGKIRSDLVALCALVALLIFQI--LTPDEALSGFSNSVVIMMIGL 59

Query: 349 IALGLALDKTGLAELVVHSI-PFDQYSPYVVILGAAILCLLMANFMSHTATANLLMPIMA 407
             +G A+ +TGLA+++   I      S   +     ++   +  F+S+T T  L++PI+ 
Sbjct: 60  FVVGGAIFQTGLAKMISSRILKLAGNSEIRLFFLVMLVTSAIGAFVSNTGTVALMLPIVV 119

Query: 408 ALGASMTPLNPLGGEVTLILVVTFAASL-GMSLPISTPPNALAHAT 452
           +L  S   +NP      L++ + FA+S+ GM   I TPPN +   T
Sbjct: 120 SLAMS-AKMNP----SRLLMPLAFASSMGGMMTLIGTPPNLVIQNT 160