Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., putative Na+/sulfate symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 15/151 (9%)

Query: 335 KMISWDVLWLVSGGIALGLALDKTGLAELVVHSIP--FDQYSPYVVILGAAILCLLMANF 392
           K ISWD+L  ++   A+  A+  +G+A+ V   I    D Y P+V++    ++  L    
Sbjct: 370 KYISWDILITIACAFAISKAMVNSGVADCVAGFIIGLSDDYGPHVLLAILFVITNLFTEL 429

Query: 393 MSHTATANLLMP----IMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNAL 448
           +++ A A L  P    I A LG S TP           +V+  AAS   S PI    N +
Sbjct: 430 ITNNAAAALAFPLALSISAQLGVSPTPF---------FVVICMAASASFSTPIGYQTNLI 480

Query: 449 AHATRNVQSQQMAKVGIILGIFGVLMSFVMV 479
                N +     ++G+ L I   L+S +++
Sbjct: 481 VQGIGNYKFTDFVRIGLPLNIITFLISVILI 511



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 24/200 (12%)

Query: 293 ITFASTILLWMLGSL------HGMNSYSVALIPVAVFSVTG---IIGKEDLKMISWDVLW 343
           I F    LL M+ +L       GM  +SV ++ + V  +T    + G  +  MI+  +L+
Sbjct: 5   IVFVLLSLLGMMAALIADKMRPGMVLFSVVVLFLCVGILTPKEMLEGFSNKGMITVALLF 64

Query: 344 LVSGGIALGLALDKTGLAELVVHSIPFDQYSPYVVILGAAILCLLMANFMSHTATANLLM 403
           LVS GI          L +++   +P  + + +   L        ++ F+++T    +  
Sbjct: 65  LVSEGIR-----QSGTLGQVIKKLLPQGKTTVFKAQLRILPSVAFISAFLNNTPVVVIFA 119

Query: 404 PIMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHAT------RNVQS 457
           PI+     S+     L     LI +       G+   I T  N + H             
Sbjct: 120 PIIKHWAKSVK----LPATKFLIPLSYVTILGGICTLIGTSTNLVVHGMILEAGYEGFTM 175

Query: 458 QQMAKVGIILGIFGVLMSFV 477
            ++ KVGI + I G++  F+
Sbjct: 176 FELGKVGIFIAIAGIIYLFI 195