Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  226 bits (576), Expect = 2e-63
 Identities = 159/546 (29%), Positives = 284/546 (52%), Gaps = 13/546 (2%)

Query: 3   LKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKM 62
           +  L+  ++I   F++  +  +  A+Y +S+L  ++ +         P ++ +  I   +
Sbjct: 1   MTRLTTAQRIVIGFAIAPLALIALALYALSDLAMLRDQAEQIVRQDWPKIDPIMVIATGV 60

Query: 63  SYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGNW 122
               R    +L  K+ AQ++Q+I+   +    I  +           E +  +  L    
Sbjct: 61  RDNARNTRDLLIDKNNAQVQQSIDATRQ---RITQAFATLEPLFDQPEGKAAYAELKKRR 117

Query: 123 NAYTAVTDQFNQTLLTQGADDA------YPILANSLSTFEALESDFTLLIGILHQAMDSN 176
            AY A   Q  Q L+ QGA D         ++   L  +++LE    +   +  +     
Sbjct: 118 EAYVAAFVQV-QALIRQGATDEAMTQLKQGVIPAELEVYKSLEGMMAMQGKVFVEREHLA 176

Query: 177 KVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTM 236
           + +   + + + +  +A    +  + +L+T  +TR + G      +  N IA+GDL+  +
Sbjct: 177 QARYNDARRNMLALVLACLALVTTVAILVTRSVTRPLGGEPNDAARVLNLIAQGDLTIRV 236

Query: 237 DRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQ 296
                 ND +  ++N  + MQQ+L  ++  I ++V +++S+ EE++ +S+Q++  ++ Q 
Sbjct: 237 PVGVGANDSV--MSNMHD-MQQSLNSMVRHIAASVDRVASSSEELSAVSSQTSSTLQLQG 293

Query: 297 YQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIG 356
           ++I Q A A+ QM AAV +VARN   ++  +  +   +Q G  +    V SI  +A+ + 
Sbjct: 294 HEIEQAAAAVNQMTAAVDEVARNAVSTSEASRVSEQTAQRGREQVQETVASITALAEGVT 353

Query: 357 EAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRT 416
           ++   + +L  +   I+ V+DVIRSIA+QTNLLALNAAIEAARAG++GRGFAVVADEVR 
Sbjct: 354 DSSGRIQQLAGRVQDISSVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRA 413

Query: 417 LAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIAN 476
           LA RTQDST EI  +I  +++ +  A  + + +   +   +     S   +  I  SI+ 
Sbjct: 414 LAHRTQDSTREIEGMIGNIRLDSGHAVSSMQNNSELVQATLLVAQRSGDALDEIAHSISQ 473

Query: 477 IADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDT 536
           I +    IASA  +Q  VA E+ RN+ +I   S++V  G++ T  A ++L Q+A SL +T
Sbjct: 474 INERNLMIASATEQQALVAREVDRNLVDIRNLSEQVMLGARHTDTAGQDLAQMAGSLHET 533

Query: 537 LRRFKI 542
           + RFK+
Sbjct: 534 VARFKV 539