Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  249 bits (635), Expect = 3e-70
 Identities = 177/558 (31%), Positives = 283/558 (50%), Gaps = 31/558 (5%)

Query: 2   FLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDK 61
           +L +  +  K+  SF + A+I+L   +  +S +  + + L    ++ L ++ N    K K
Sbjct: 17  WLNDAKLSTKLITSFFLCALITLAVGLLGVSGVSALSTRLQGVFNNNLVSVANTSQTKTK 76

Query: 62  MSYWRRTQF---------AVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEE 112
                R  +         A   MKDE        + N++ +E   +   Y K     +E 
Sbjct: 77  AVGQTRDMYRLYVATAGNAPQSMKDEFLASM---KANQLASE--KAFADYRKGNLAEDER 131

Query: 113 QTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLS-TFEALESDFTLLIGILHQ 171
               ++  +W  Y A+  Q+   +     ++   +L   L   +  +    T++I     
Sbjct: 132 IAGDQMARDWPVYQAMVQQYLAMMAAGDLENGRTLLLGDLQKAYRKVMDQLTIMI----- 186

Query: 172 AMDSNKVQILSSVKTLNSTSVASNIAILAIMV-------LMTWLLTRLICGPLAIVMKQS 224
             DSN  QI    K      V +   + + +V       L+   ++RLI  P+A+ +  +
Sbjct: 187 --DSNDRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLLGMFISRLISRPIAVAVDCA 244

Query: 225 NAIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQI 284
             IA+GDL+Q +  +S   DE G L  A   MQ +L+  I +I SA  QL+SA EE+T +
Sbjct: 245 QRIAQGDLTQHITSNS--RDEAGQLLKALGDMQTSLKTTIQQIASASDQLASAAEELTAV 302

Query: 285 SNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASM 344
           ++  +  +  Q  +I Q ATA+ +M +AV +VARN   ++  + + + ++ EG  +  S 
Sbjct: 303 TDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQSTSSQASEGRDQARSA 362

Query: 345 VRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESG 404
           V++I      I  +   V +L  Q   I  V+DVIR IA+QTNLLALNAAIEAARAGE G
Sbjct: 363 VQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLLALNAAIEAARAGEQG 422

Query: 405 RGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQ 464
           RGFAVVADEVR LA RTQ STGEI ++I  +Q  A  A DA  +S++ + +  +    + 
Sbjct: 423 RGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKSQALVTETQDLARATG 482

Query: 465 SLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACR 524
             +  I ++I+ I D    IA+A  EQ  VA E+ RN+ NI   S + A G+ QT  + +
Sbjct: 483 EALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDLSTQTAAGANQTNASSQ 542

Query: 525 ELTQLAVSLQDTLRRFKI 542
           EL+ LA+S    + RF++
Sbjct: 543 ELSNLALSFNSLVGRFRL 560