Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (615), Expect = 6e-68
 Identities = 144/361 (39%), Positives = 221/361 (61%), Gaps = 7/361 (1%)

Query: 182 SSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSI 241
           S +  L+ T++A  + ILA M++     TR I  PL   +   + IA GDL+Q    +  
Sbjct: 287 SRILQLSCTALAMLLGILAAMII-----TRQITRPLQDTLAVVDRIAAGDLTQGTVVTR- 340

Query: 242 GNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQ 301
             DELG L    ++M   LR LI  I   VTQ++SA EE++ ++ Q++ G+  Q+ +  Q
Sbjct: 341 -GDELGVLQQGIQRMGTTLRDLIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQ 399

Query: 302 VATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQT 361
           VATAM +M A V +VARN E + + A  A+ +++ G +  A  +  I+++A  +G +   
Sbjct: 400 VATAMQEMSATVHEVARNAEQACTVASEADAQARIGDQVVAQAIVQIERLASEVGRSVDA 459

Query: 362 VSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRT 421
           + ELEQ+S++I  ++DVIR++A+QTNLLALNAAIEAARAG++GRGFAVVADEVR LA RT
Sbjct: 460 MDELEQESARIGKIMDVIRAVAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRT 519

Query: 422 QDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVG 481
           Q ST EI +++  LQ   +Q       SR   D  VE    +   + +I ++++ I  + 
Sbjct: 520 QHSTEEIESLVAGLQNGTRQVSSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMN 579

Query: 482 TQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541
            QIA+A  +Q SVA+E+SR++ N+   S++ A  S++TA +  EL +L   LQ  +  FK
Sbjct: 580 QQIAAAAVQQSSVAEEISRSILNVRDVSEQTASASEETAASSIELARLGNQLQQLVSHFK 639

Query: 542 I 542
           +
Sbjct: 640 V 640