Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  236 bits (601), Expect = 2e-66
 Identities = 158/495 (31%), Positives = 266/495 (53%), Gaps = 15/495 (3%)

Query: 48  TLPAMENVDAIKDKMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVW 107
           +L  +  + ++ D+ ++ R   F      D  Q+ +       +Q  ++  L       W
Sbjct: 21  SLKRINKLGSLFDQTAFSRDANFVYALTADSEQLAKHDANLKTMQQMLSGVLDDIRAGGW 80

Query: 108 PGEEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIG 167
           P E+  + KRL     AY    +Q  QT    GAD    +L         L    + L  
Sbjct: 81  PLEDLDSIKRLDEKLRAYIDTRNQ-KQT----GADVTQTVLK--------LNESLSSLQN 127

Query: 168 ILHQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAI 227
            +++   + +++  +SV  + +      +  L +  L++W++ R I  PL   ++ S  I
Sbjct: 128 EINELYAAEEIRAKTSVDLVFAILGGVTLFALVLGGLISWIIGRQIVIPLQQALQASERI 187

Query: 228 AKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQ 287
           A GDL  T++  S   DELG L  +   M Q LR +I +I  +  +L+++  ++  I+ Q
Sbjct: 188 ANGDL--TVELQSDRADELGHLLRSINNMAQRLRDVISQIGDSSHRLAASASQLATITTQ 245

Query: 288 SADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRS 347
           +  G+  Q+ +   VATAM +M   V +VARN+ED+A  A  A+H++      +   V  
Sbjct: 246 TQAGIDSQKSETDLVATAMTEMTTTVQEVARNSEDAAGAAKKADHEASNALEVSQQAVAQ 305

Query: 348 IQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGF 407
           I+ +A  +G + ++++ L Q+S +I  V+DVI+++A QTNLLALNAAIEAARAGE+GRGF
Sbjct: 306 IETLAREVGMSAESMTCLHQESERIGGVLDVIKTVAGQTNLLALNAAIEAARAGEAGRGF 365

Query: 408 AVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLM 467
           AVVADEVR+LA RTQ S+ EI ++IE LQ +A+++    + S       V    ++   +
Sbjct: 366 AVVADEVRSLAQRTQQSSEEIESLIEGLQRIAEESSRMMQASVQQTQSTVTGVRNTGDAL 425

Query: 468 ISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELT 527
            +I + +++I  +   IA+A  EQ +VA+E++R+V N+   + + A  S + + +  EL 
Sbjct: 426 AAITQQVSDIQQMSMLIATAAEEQTAVAEEINRSVLNVRETADQSATASAEISVSSVELA 485

Query: 528 QLAVSLQDTLRRFKI 542
           QL   LQ  +RRFK+
Sbjct: 486 QLGGDLQRLVRRFKV 500