Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  217 bits (552), Expect = 1e-60
 Identities = 134/341 (39%), Positives = 197/341 (57%), Gaps = 4/341 (1%)

Query: 203 VLMTWLLTRLICGPLAIVMKQSNAIAKG--DLSQTMDRSSIGNDELGTLANASEQMQQNL 260
           VL+  +L  ++  P+  ++ +   IA+G  DL   ++  S   DELG L  A  +    L
Sbjct: 205 VLVLTVLPLVVLSPMRRLLHRVEQIAEGGGDLKGRLEVRSA--DELGQLGGAFNRFLDKL 262

Query: 261 RQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNT 320
           + LI E+     ++ SA   M  ++  +   +  +   + QV+TA  QM AAV +VA N 
Sbjct: 263 QPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSAAVHEVAHNA 322

Query: 321 EDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIR 380
             ++  A  A+ +S++GA   +S + SI+Q+A  +  A  T+  L Q++S I  V++VIR
Sbjct: 323 VSASDAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSSIGAVLEVIR 382

Query: 381 SIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAK 440
            IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQDST +I   IE+LQ    
Sbjct: 383 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRIERLQSGVA 442

Query: 441 QAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSR 500
           +A  A +   S     VE+      ++     SI  I D+  QIA+AC EQ SV +E++R
Sbjct: 443 KAVQAMQVGSSKARDSVERAAGVDEVLSGTSGSIQRINDMAAQIANACEEQSSVTEEIAR 502

Query: 501 NVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541
           N+ +I   S E A  S Q+ QA ++L+ L+ +L +   RF+
Sbjct: 503 NISDIRDLSNEAASNSAQSMQASQQLSSLSRNLAELTGRFR 543