Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  255 bits (652), Expect = 3e-72
 Identities = 148/354 (41%), Positives = 218/354 (61%), Gaps = 2/354 (0%)

Query: 189 STSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGT 248
           S  + S +  L + VL  WL+TR I  PL   M     IA GDLS+T        DELG 
Sbjct: 289 SRLIVSTLLALVLGVLAAWLITRQIILPLRTTMADVERIASGDLSETAQIQR--RDELGV 346

Query: 249 LANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQ 308
           L    +QM   LR+LI  I   V+Q+S+A EE++ ++ Q++ G+  Q+ +  QVATAM +
Sbjct: 347 LQRGIQQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHE 406

Query: 309 MKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQ 368
           M A V +VARN E +A  A  A+ +++EG R    +V  I+++A  +  + + ++ L+++
Sbjct: 407 MSATVQEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEE 466

Query: 369 SSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEI 428
           S +I  V++VIR++A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI
Sbjct: 467 SDKIGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEI 526

Query: 429 TTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASAC 488
             ++  LQ   +Q       SR   D  VE    + + + SI  +++NI  +  QIA+A 
Sbjct: 527 EGLVAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAA 586

Query: 489 SEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
            EQ +VA+E+SR+V N+   S++ A  S++TA +  EL +L   LQ  + RF++
Sbjct: 587 EEQSAVAEEISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640