Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  223 bits (568), Expect = 2e-62
 Identities = 136/359 (37%), Positives = 214/359 (59%), Gaps = 12/359 (3%)

Query: 194 SNIAILAIM--------VLMTWLLTRLICGPLA--IVMKQSNAIAKGDLSQTMDRSSIGN 243
           SN+A + ++        +L  WL++R I  PL   +VM  + +  +GDL+Q ++  S   
Sbjct: 353 SNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDS--R 410

Query: 244 DELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVA 303
           +ELG +A         L+ +I E++S+V ++S A E    I+ ++  G++ Q  +I  VA
Sbjct: 411 NELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVA 470

Query: 304 TAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVS 363
           TA+ +M A   DVARN   +A  A  A+  + +G         +I ++A  IG A   V 
Sbjct: 471 TAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQ 530

Query: 364 ELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQD 423
            L + S  I+ ++  IRSIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ 
Sbjct: 531 TLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQ 590

Query: 424 STGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQ 483
           +TGEI  +I++LQ   +      E+S++   + VEQ + +   + +I ++++ I D+  Q
Sbjct: 591 ATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQ 650

Query: 484 IASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
           IASA  EQ +VA++++RNV NI   +Q+VA G+ + +QA   LT+LA   +  + +F++
Sbjct: 651 IASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709