Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  248 bits (634), Expect = 4e-70
 Identities = 162/469 (34%), Positives = 256/469 (54%), Gaps = 53/469 (11%)

Query: 94  EINDSLVAYGKT--VWPGEEEQ-TFKRLMGNWNAYTAVTDQFNQT--------------- 135
           E++ ++ A G    VW  +++Q +  + +     Y A  D+F Q                
Sbjct: 213 ELHGNVTAIGSNLKVWLNDDQQASMDKALAELEQYRAAFDEFRQNRGERLELERSMAQQS 272

Query: 136 -LLTQGADDAYPILANSLSTFEALESDFTLLIGILHQAMDSNKVQILSSVKTLNSTSVAS 194
            ++   AD+A   LAN+ +  +  +    LL+G+                          
Sbjct: 273 EVVIAAADEA---LANASNAMQQQQRSSYLLLGV-------------------------- 303

Query: 195 NIAILAIMV--LMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANA 252
            I  LAI V  L   +++R+I GPL   ++Q+  +A GDL  T   +S   DE+G L NA
Sbjct: 304 -IGALAIFVGLLAATVISRMIVGPLRSTVQQAQRVANGDL--THSEASARRDEVGQLQNA 360

Query: 253 SEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAA 312
              M Q+LR LI  I   V+Q+++A ++++ ++ Q++ G++ Q+ +  QVATAM +M A 
Sbjct: 361 MHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVETEQVATAMHEMAAT 420

Query: 313 VADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQI 372
           V +VARN E ++  A  A+ ++++G R     V  I  +A  + ++   +  L  +S +I
Sbjct: 421 VQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQSAHAIEALHAESGRI 480

Query: 373 NVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTII 432
             V++VIR++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT DST EI  +I
Sbjct: 481 GSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTHDSTEEIEGLI 540

Query: 433 EKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQD 492
             LQ +A+QA +  + SRS   + V+  N +   +  I ES++ I  +  QIA+A  +Q 
Sbjct: 541 ANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIEQMNQQIAAAAEQQS 600

Query: 493 SVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541
           +VA+ +S +V  +     + A  ++QTA A  EL +L V LQ  +R+F+
Sbjct: 601 AVAENISESVTRVRDIGDQSASATEQTAGASAELARLGVELQGLVRQFR 649