Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  252 bits (643), Expect = 3e-71
 Identities = 182/559 (32%), Positives = 304/559 (54%), Gaps = 37/559 (6%)

Query: 1   MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKD 60
           M ++N+++ ++ A  F +I +I L   ++ I ++ KI+SE    +D+ LP+   + A+ D
Sbjct: 1   MLVRNMNVSQRSALGFGLIGLIVLLLGLFAILQMGKIRSEAAKLSDEWLPS---IVALGD 57

Query: 61  KMSYWRRTQFAVLPMK-DEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLM 119
              +  RT+   L +  D  ++ +      R + E++    AY +TV   +E + F+   
Sbjct: 58  LNQHTLRTRIHTLRLIIDRTRVEENRATLARFRNELSSLEDAYQRTVDHPQERELFQNYQ 117

Query: 120 GNWNAYTAVTDQFNQTLLTQGA---DDAYPILANSLSTFEALESDFTLLIGILHQAMDSN 176
               A TA  +  ++ +  +G    ++A  ++ + L+T     +   L   +      +N
Sbjct: 118 ---RARTAFDEVLSEIVRLEGQGRIEEAVEVVGSRLNT-----AGTGLNEAVARMTAFNN 169

Query: 177 KVQILS--SVKTLNSTSVASNIAILAIMVLMT----WLLTRLICGPLAIVMKQSNAIAKG 230
           +   LS  S   +  +S A  I  + + VL+T    W+ TR I  PL   +  +  +A G
Sbjct: 170 EQSALSAASAAAIFQSSQAWMIGTIVLAVLLTVVLAWIFTRSIVQPLQQAVSIAEVVASG 229

Query: 231 DLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSAD 290
           DL++ +D   +G DE   L  A   MQ+ LR  I  I  + +QL+SA E++  ++  S  
Sbjct: 230 DLTRHID--IVGRDEPARLLTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTR 287

Query: 291 GMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQ 350
           GM +Q ++I Q ATA+ +M AAV +VARN   ++  +  ++  +Q G  +   ++R++  
Sbjct: 288 GMNQQSHEIEQAATAVNEMTAAVDEVARNAVATSEASRDSDATAQHGRNQ---VIRTVDS 344

Query: 351 VADIIGEAGQTVSELEQQSSQ---INVVVDVIRSIADQTNLLALNAAIEAARAGESGRGF 407
           +  + G+  QT +E+E+ ++Q   I+ V+DVIRSIA+QTNLLALNAAIEAARAG++GRGF
Sbjct: 345 IGQLAGDVTQTSAEVERLAAQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGF 404

Query: 408 AVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDA----TERSRSSIDKCVEQGNHS 463
           AVVADEVR LA RTQ ST EI  +I  +     +A  A     ER+R+++D     G   
Sbjct: 405 AVVADEVRALAHRTQQSTQEIEQMIGDVHQGTDRAVQAMQVSNERARTTLDLARAAG--- 461

Query: 464 QSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQAC 523
              +  I  +I+ I++    IASA  EQ  VA E+ RN+ NI   S + + G+ Q++ A 
Sbjct: 462 -EALEEIAAAISQISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGASQSSAAS 520

Query: 524 RELTQLAVSLQDTLRRFKI 542
           +EL +LAV L   +  F++
Sbjct: 521 QELARLAVGLNGLVGGFRV 539