Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  230 bits (586), Expect = 1e-64
 Identities = 165/546 (30%), Positives = 276/546 (50%), Gaps = 16/546 (2%)

Query: 4   KNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDKMS 63
           + + I  +    F+V+A++     ++ ++ +  ++ +        LP ++ +  +  +  
Sbjct: 3   RQMRIALRAGLGFAVVALLVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEFL 62

Query: 64  YWRRTQFAVLPMKDEAQIR--QTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGN 121
             R +   +L  +   + R  +T++   +  A+    L           ++   K L+ N
Sbjct: 63  MIRASTLRLLISEPAERSRGAETLDGLRKTLAQERQDLDRL-------IQDTEGKALLAN 115

Query: 122 WNAYTAVTDQFNQTL----LTQGADDAYPILANSLSTFEALESDFTL-LIGILHQAMDSN 176
           ++   A  + F + +    L    ++A  I    L+      S     LIG+   A ++ 
Sbjct: 116 FDQSLARYESFQRRIVELALQNRMEEAIEITRGELNEHARSTSKAVYDLIGLNRNAANAA 175

Query: 177 KVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTM 236
               L    +     V + I      +++  LLTR I  PLA  +  +  IA GDL++  
Sbjct: 176 SAHALEVAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGGDLTRHF 235

Query: 237 DRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQ 296
               +G+DE   L +A + MQ++LR+ I  I  +  QL+SA EE+  ++  S  G+ +Q 
Sbjct: 236 Q--VVGSDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQN 293

Query: 297 YQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIG 356
           ++I Q ATA+ +M AAV +VARN   ++  +  ++  +Q G ++    V SI  +AD + 
Sbjct: 294 HEIEQAATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVT 353

Query: 357 EAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRT 416
           +    V  L  Q   I+ V+DVIRSIA+QTNLLALNAAIEAARAG++GRGFAVVADEVR 
Sbjct: 354 QTATEVERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRA 413

Query: 417 LAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIAN 476
           LA RTQ ST EI  +I  +     +A  A + S       +E    +   +  I  +I+ 
Sbjct: 414 LAHRTQQSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQ 473

Query: 477 IADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDT 536
           I++    IASA  EQ  VA E+ RN+ NI   S + + G+ QT+ A +EL +LA+ L + 
Sbjct: 474 ISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNL 533

Query: 537 LRRFKI 542
           + RF++
Sbjct: 534 VARFQV 539