Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  216 bits (549), Expect = 2e-60
 Identities = 129/349 (36%), Positives = 210/349 (60%), Gaps = 4/349 (1%)

Query: 196 IAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKG--DLSQTMDRSSIGNDELGTLANAS 253
           + I AIM ++  +L R I  PL   M     IA G  DL++T+D S  GNDEL TL    
Sbjct: 198 LLISAIMAVLVAILIRSIVRPLRHTMAAMANIASGEADLTRTLDVS--GNDELTTLGRDF 255

Query: 254 EQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAV 313
            +  Q LR ++ ++      L  +   ++Q+S Q+ +  ++Q  Q+ QVATA+ ++  AV
Sbjct: 256 NRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYAV 315

Query: 314 ADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQIN 373
            +VA+N E ++S+  +A +++ +G R   + ++ I +++  IG+A   +  L  ++++I 
Sbjct: 316 QEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKIG 375

Query: 374 VVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIE 433
            V++VI SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST EI  +IE
Sbjct: 376 SVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMIE 435

Query: 434 KLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDS 493
           +LQ  +  A +    S  +    VEQ + +   +  I +++ N++ +   IASA  +Q  
Sbjct: 436 RLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQSH 495

Query: 494 VADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
           V +++++NV      +QE    ++Q+++A ++L +LA  L   L +F++
Sbjct: 496 VVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544