Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  227 bits (578), Expect = 1e-63
 Identities = 154/437 (35%), Positives = 239/437 (54%), Gaps = 11/437 (2%)

Query: 111 EEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSL-STFEALESDFTLLIGIL 169
           E +   RL G   A  A  D   + L           + N L    + +   F+ LI   
Sbjct: 109 ERRVVTRLEGLMKAADAPLDDLERILDRHSEKRLAAFVVNDLYPLIDPISEGFSELI--- 165

Query: 170 HQAMDSNKVQILSSVKTLNSTSVASNIAILAIMV---LMTWLLTRLICGPLAIVMKQSNA 226
           H  +   K +   ++       V +   +LA+++   L   +L R I  PL  + + + +
Sbjct: 166 HLQLGEAKAEYDEALALYERNRVLNIGLLLALLIGGGLFAMVLLRSISRPLEELKQAAAS 225

Query: 227 IAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISN 286
           +A GDLS+T+  +  G DE+  +  +  QMQQ LR  + +I  + TQL+SA EE+  ++ 
Sbjct: 226 VAAGDLSRTI--ACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQ 283

Query: 287 QSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVR 346
            +A G+ +Q  ++   ATA+ +M AAV +VA N   ++  +  A   + +G R+  +  +
Sbjct: 284 HTAQGIHQQNEEVQMAATAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQ 343

Query: 347 SIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRG 406
           +I Q+++ + +   TV+ L ++++ I  VVDVIR+IADQTNLLALNAAIEAARAGE+GRG
Sbjct: 344 TIDQLSEKLQQTAGTVTRLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRG 403

Query: 407 FAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQA-KDATERSRSSIDKCVEQGNHSQS 465
           FAVVADEVR LA RTQ ST EI  +I  +Q   +Q+ +D  + S  +       G   Q+
Sbjct: 404 FAVVADEVRNLAQRTQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQA 463

Query: 466 LMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRE 525
           L + I E +  I ++   IASA  EQ  VA E+ RN+  I   S++ A G+QQT+ A  E
Sbjct: 464 LGL-IAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDE 522

Query: 526 LTQLAVSLQDTLRRFKI 542
           L +LA  L   + RF++
Sbjct: 523 LARLATHLNQLVGRFRL 539