Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  238 bits (608), Expect = 3e-67
 Identities = 177/547 (32%), Positives = 275/547 (50%), Gaps = 11/547 (2%)

Query: 1   MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKD 60
           M L+ L+I ++    F++I+++      + ++++  I+   +    + LP+M  V+ I++
Sbjct: 1   MNLRKLTIARRAGLGFTLISLLVALLGWFALAQMSTIRQSEVAVETNWLPSMRVVNDIRE 60

Query: 61  KMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMG 120
            M   R     +    D A I     + +    +++  L      V   EE+    + M 
Sbjct: 61  IMLRIRTISLRMALDTDPASIPTYRGQMDVRLGDLDKKLSVLKTFVDTPEEKSLTDQFMV 120

Query: 121 NWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIG-----ILHQAMDS 175
               Y +  D+ +  L +QG  D+  +    L   + +       +G      L Q    
Sbjct: 121 TVGQYRSALDR-SFALASQG--DSVGLNKLLLVDMKQIVDGSGKQLGDLADFYLTQVDAE 177

Query: 176 NKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQT 235
            K       K+ +   +   IA L  + L  WL TR I GPL   +  +  +A GDL+ T
Sbjct: 178 GKSAGAQYDKSRDIVIIFVVIAALCTIGLALWL-TRSIVGPLQRAVTAAEQVANGDLTHT 236

Query: 236 MDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQ 295
           ++    G DE+  L  A   MQ NLR+ +  I S+ TQL+SA  E+  ++  S  G+ +Q
Sbjct: 237 IEVD--GEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQ 294

Query: 296 QYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADII 355
             +I Q ATA+ +M +AV +VARN   ++  +  ++  +  G       V+SIQ + D +
Sbjct: 295 NAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNV 354

Query: 356 GEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVR 415
                 V  L  QS  I  V+DVIRSIA+QTNLLALNAAIEAARAGESGRGFAVVADEVR
Sbjct: 355 QATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVR 414

Query: 416 TLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIA 475
            LA RTQ ST EI +++  ++  + QA D+   SR+  D  +     +   +  I  SI 
Sbjct: 415 ALAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSIN 474

Query: 476 NIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQD 535
            I++    IASA  EQ  V+ E+ RN+ NI   S +  QG+ Q + +  EL++LA  L  
Sbjct: 475 QISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQ 534

Query: 536 TLRRFKI 542
            + RFK+
Sbjct: 535 VVSRFKV 541