Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  241 bits (614), Expect = 8e-68
 Identities = 148/406 (36%), Positives = 236/406 (58%), Gaps = 10/406 (2%)

Query: 145 YPILANSLSTF----EALESDFTLL-IGILHQAMDSNKVQILSSVKTLNSTSV---ASNI 196
           Y +L  S+S      E + +D     +    +A D   +Q++S+ K   +  V   +  +
Sbjct: 278 YKVLMTSISDMLQQTEQIRNDLQQQSVATAARADDLAALQVISAKKEQQTAVVQLLSVAL 337

Query: 197 AILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASEQM 256
            +L + +   +L+TR I  PL   +  +  IA GDL  T D S+   DELG L N  + M
Sbjct: 338 VVLLVGIFAAFLITRQITVPLNSTVIAARRIADGDL--THDSSTTRQDELGLLQNTMQHM 395

Query: 257 QQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADV 316
             +LR LI  I + VTQ+++A E+++ +S Q++ G+  Q+ ++ QVATAM +M + V +V
Sbjct: 396 TVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMASTVQEV 455

Query: 317 ARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVV 376
           ARNTED++  A  A+ ++  G+       R I Q+A  + + G+ +  L + S +I  V+
Sbjct: 456 ARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVI 515

Query: 377 DVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQ 436
           DVI+++A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+ST EI  +I+ LQ
Sbjct: 516 DVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQ 575

Query: 437 VMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVAD 496
                A    + S    +  V     ++  ++ I +SI  I  +  QI++A  +Q +V +
Sbjct: 576 KGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQSAVTE 635

Query: 497 ELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
           E++R+V ++   + + A  ++Q+A +  EL +L   LQ  + RFKI
Sbjct: 636 EINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFKI 681