Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  227 bits (579), Expect = 8e-64
 Identities = 141/365 (38%), Positives = 212/365 (58%), Gaps = 7/365 (1%)

Query: 182 SSVKTLNSTSVASNIAILAIMVLMTWLLTRLIC----GPLAIVMKQSNAIAKGDLSQTMD 237
           SS    N+ S+A+ + I  + V++T +  R I     G  + V   +  IA+GDLS T++
Sbjct: 189 SSATQANNLSIAATLTIAILGVIVTLMTIRSILSAIGGEPSTVATITRTIARGDLSSTIN 248

Query: 238 RSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQY 297
            S+   ++  ++A A   MQ  LR  + +I S+ TQL++A EEMT I+     G++ Q  
Sbjct: 249 ISA---NDTSSVAAAVVAMQTQLRDTLQQISSSATQLAAAAEEMTAITEDGVQGIQRQNN 305

Query: 298 QITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGE 357
           +I Q ATA+ +M +AV +VARN E +A  +  A   +Q+G       V SI  ++  + +
Sbjct: 306 EIDQAATAVNEMTSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVTSINTMSTDVQK 365

Query: 358 AGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTL 417
               + EL  QS  I  V+DVIR +A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR L
Sbjct: 366 TATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRAL 425

Query: 418 AGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANI 477
           A RTQ ST EI  ++  +Q   ++A  +   +     + +     +   +  I  +++ I
Sbjct: 426 AHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLTVISAAVSEI 485

Query: 478 ADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTL 537
            D+   IASA  +Q  VA E+ RN+ NI   S + + G+QQTA A REL+ LA+ L + +
Sbjct: 486 NDLNLVIASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRELSTLALDLNNIV 545

Query: 538 RRFKI 542
            RF++
Sbjct: 546 GRFRL 550