Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  248 bits (634), Expect = 4e-70
 Identities = 139/354 (39%), Positives = 223/354 (62%), Gaps = 2/354 (0%)

Query: 189 STSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGT 248
           +T +   +  + + ++   ++TR I  PL   +   + IA GDL+QT+  +   +DELG 
Sbjct: 289 TTQITCTLLAIILGIIAAVIITRQITRPLRETLAVVDRIASGDLTQTL--AVTRSDELGV 346

Query: 249 LANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQ 308
           L    ++M   LR+LI  I  +V Q++SA EE++ ++ Q++ G+  Q+ +  QVATAM +
Sbjct: 347 LQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHE 406

Query: 309 MKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQ 368
           M A VA+VARN E ++  A  A+ ++++G +     +  I+++A+ +G +   ++ELEQ+
Sbjct: 407 MSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQE 466

Query: 369 SSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEI 428
           S +I  V+DVI+++A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI
Sbjct: 467 SDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEI 526

Query: 429 TTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASAC 488
            T++  LQ   +Q       SR      V     + + + SI +++++I  +  QIA+A 
Sbjct: 527 ETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAA 586

Query: 489 SEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
            EQ +VA+E+SR++ N+   S++ A  S++TA +  EL +L   LQ  + RF+I
Sbjct: 587 EEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFRI 640