Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  235 bits (600), Expect = 4e-66
 Identities = 144/433 (33%), Positives = 244/433 (56%), Gaps = 8/433 (1%)

Query: 110 EEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIGIL 169
           +  +  K L G     T  + Q + T LT  ++    +  N+L+  E ++     L   +
Sbjct: 249 DSTKVLKMLEGKDTLVTLKSRQIDSTQLT--SEKLTLVEKNALTVTEQMKR----LAKDI 302

Query: 170 HQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAK 229
               +    Q L+ + + +  ++   +  + + V++++ + R +   L  V    N +A 
Sbjct: 303 ETVTNDISNQALNDINSASLRTLILVVIAIVVAVVISFAVVRPLKRSLDEVNGALNVLAS 362

Query: 230 GDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSA 289
           GDL+  +D +  G+DE   L+    ++  +LR LI  I+    QL++A EE + I++Q+ 
Sbjct: 363 GDLTHKLDDT--GHDEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTT 420

Query: 290 DGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQ 349
            G++EQ+ Q+ QVATA  ++ ++   V  + +D+ SQ   A+ ++Q          R+I 
Sbjct: 421 IGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTIL 480

Query: 350 QVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAV 409
            +AD + +A + ++++   S+ I  ++DVIR IA+QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 481 SLADEVAKASKVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAV 540

Query: 410 VADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMIS 469
           VADEVR+LA RTQDST EI  +IE LQ   +QA    +  ++    CVE+   +   + +
Sbjct: 541 VADEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQT 600

Query: 470 IEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQL 529
           I  S+    D GT IA A  EQ+ V+ ++S  +E+I   S+E A G++QTA++  E+ +L
Sbjct: 601 ISHSVHKAYDAGTHIAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARL 660

Query: 530 AVSLQDTLRRFKI 542
           A  LQ +++ F++
Sbjct: 661 AEELQSSVKEFRV 673