Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  220 bits (561), Expect = 1e-61
 Identities = 149/445 (33%), Positives = 248/445 (55%), Gaps = 34/445 (7%)

Query: 130 DQFNQTLL----TQGADDAYPILANSLS--------TFEAL---ESDFTL-----LIGIL 169
           D+F QTL     T    D  P +A+ +          FEAL   E +F L      +G L
Sbjct: 178 DKFQQTLRSFDSTLDGSDLSPDVADEIRRLMKDYQMNFEALVNKEKEFGLGKEDGKMGAL 237

Query: 170 HQAMDSNKVQILSSVKTL----------NSTSVASNI-AILAIMV-LMTWLLTRLICGPL 217
              +D ++ Q    ++ L          +S ++A+ + A++A++V ++T+++ R I  P+
Sbjct: 238 RSVIDQSE-QATQELRELALHEIHDEEGDSVAMATTLFAVIAVLVAIVTFMIIRAIITPI 296

Query: 218 AIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSA 277
             + +  + + K D + T+   + G DE+  +     +M ++ R LI ++  AV  ++ +
Sbjct: 297 NNINQVISHVGK-DKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNES 355

Query: 278 VEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEG 337
            +E++  + Q++DG+  Q  +   VATA+ +M A + ++A+NTE +A +A   +  +Q G
Sbjct: 356 CQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVG 415

Query: 338 ARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEA 397
            +     +  IQ +A  +  +   V+ELE+ S  I  V+DVIR IA+QTNLLALNAAIEA
Sbjct: 416 QQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEA 475

Query: 398 ARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCV 457
           ARAGE GRGFAVVADEVR+LA RTQ+ST EI  II+ LQ   +      E S+    +  
Sbjct: 476 ARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESA 535

Query: 458 EQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQ 517
           EQ   + +++  I + + NI D+ TQIA+A  EQ SVA E+++NV  I   ++E +  + 
Sbjct: 536 EQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAM 595

Query: 518 QTAQACRELTQLAVSLQDTLRRFKI 542
             A+A  ++ + A  LQ  + +F++
Sbjct: 596 ANAKASDDVRERAEYLQRAVSQFRV 620