Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (614), Expect = 8e-68
 Identities = 147/397 (37%), Positives = 236/397 (59%), Gaps = 10/397 (2%)

Query: 152 LSTFEALESDFTLLIGILHQAMDSNKVQILSSVKTLNSTSVAS--NIAILAIMVLMTWLL 209
           L+T E+  +     +G L++A++S    +  SVK ++    AS   +A++ I +++  L+
Sbjct: 282 LNTVESNATAVNQSMGSLNKAIESTSQAV--SVKAIDEIDSASYKTLALVLIAIVVAVLV 339

Query: 210 TRLICGPLAI----VMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLID 265
           +  +  PL      V    N +A G+L+  +D S  G+DE   L+    ++  +LR LI 
Sbjct: 340 SIAVIRPLKNSLDKVNNALNILASGNLTHKLDDS--GHDEFAELSRNCNRLVDSLRTLIQ 397

Query: 266 EIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSAS 325
            I+    QL++A EE + I+ Q+  G++EQ+ Q+ QVATA  Q+ ++   V+ + +++ +
Sbjct: 398 GILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVDQVATATTQLSSSAMQVSTSADEALN 457

Query: 326 QAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQ 385
           Q   A+ ++Q          R+I  +AD + +AGQ ++++   S+ I  ++DVIR IA+Q
Sbjct: 458 QIRQADEEAQHMRAIADENKRTILALADEVAKAGQVINKVHSDSASIGSILDVIRGIAEQ 517

Query: 386 TNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDA 445
           TNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQDST EI  +I+ LQ   ++A   
Sbjct: 518 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTQEIQQMIQVLQQGTQEAVSV 577

Query: 446 TERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENI 505
            E  R   + CVE+   +   + SI  ++    D GT IA+A  EQ+ V+ ++S  +E+I
Sbjct: 578 MELGRQQANSCVEKTEQANVALESISNAVHYAHDSGTHIANAAQEQNLVSQQVSEKLEHI 637

Query: 506 HLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
              S+E A G+ QTAQ+  ++ QLA  LQ ++  FK+
Sbjct: 638 AAISEETATGADQTAQSSHQVAQLAEELQASVGEFKV 674