Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  212 bits (540), Expect = 3e-59
 Identities = 132/368 (35%), Positives = 207/368 (56%), Gaps = 1/368 (0%)

Query: 176 NKVQILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQT 235
           NK +I+S   +L     A  + +L I  L+   + ++    L  V    N IA+GD   T
Sbjct: 263 NKQEIMSQATSLAWWMSAVGVGLLVIFGLVLVAIFKMQFKDLERVALALNDIAEGDGDLT 322

Query: 236 MD-RSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKE 294
           +   ++  +DE+G LA+   +  + L  +I  + +   QL    +  +  +  ++  ++ 
Sbjct: 323 VRIHTANSHDEIGILASGFNRFVERLHGMISRMHNIAGQLEYQAKGSSASAADNSQRIEV 382

Query: 295 QQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADI 354
           QQ ++T VATA+ +M +A  ++A N E +A  A  A   S  G ++     +SI+ +A+ 
Sbjct: 383 QQDEVTMVATAVTEMASATEEIASNAEHTAQTAQNAVSLSNHGQKQVMQSQQSIRNLANE 442

Query: 355 IGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEV 414
           +  AG+ +SEL + S +IN ++  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 443 VDTAGRIISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 502

Query: 415 RTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESI 474
           R L+ RT  ST EI  +IE LQ  A +A  +  +S    +  V   N +   ++ I ++I
Sbjct: 503 RVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAI 562

Query: 475 ANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQ 534
             I+D+ +QIA+A  EQ SV  E++RN E+I   S+ ++  +Q      +EL  LA SLQ
Sbjct: 563 NEISDMASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSAMVQSQELAHLAASLQ 622

Query: 535 DTLRRFKI 542
             + RFK+
Sbjct: 623 QEVSRFKL 630