Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  218 bits (554), Expect = 6e-61
 Identities = 129/349 (36%), Positives = 205/349 (58%), Gaps = 2/349 (0%)

Query: 194 SNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANAS 253
           + + ++ +M  + ++++R I  PL  V      IA G+L+  +  +  G DEL  LA+  
Sbjct: 187 TTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQL--AVTGKDELAALAHNI 244

Query: 254 EQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAV 313
            Q   ++R  + E   +   +S A   +   + ++   +  Q+ Q+ Q+ATAM +M A +
Sbjct: 245 NQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATI 304

Query: 314 ADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQIN 373
           ADVA N E +A     A  ++  G ++  + V  I  +A  + +A Q V++L+++  QI+
Sbjct: 305 ADVANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQIS 364

Query: 374 VVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIE 433
            V  VI +I+DQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT+ ST EI   I 
Sbjct: 365 EVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTIS 424

Query: 434 KLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDS 493
            LQ  A  A +A + SR   +K V+Q   + + +  I   I +++D+ TQIA+A  EQ +
Sbjct: 425 LLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSA 484

Query: 494 VADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
           VA+E++RNV  I+ ++ EV++ +   AQ    L +L+++L + L  FK+
Sbjct: 485 VAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL 533