Pairwise Alignments

Query, 407 a.a., alanine racemase from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., alanine racemase, biosynthetic (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 34/362 (9%)

Query: 46  EISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTII-AQGIPCVGVASNAE 104
           EIS    Q+N+   +   +++ ++ A++KA+ YG+G+  +   +  A G    G+A   E
Sbjct: 8   EISSSALQNNLAVLRQQASSS-QVMAVVKANGYGHGLLNVAKCLNNADGF---GLARLEE 63

Query: 105 ARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGT---HQQALDLAELAKQSGKTLK 161
           A  +R    K  L+ +        S+ L L +E  I T   H+  +++ E A  S K + 
Sbjct: 64  ALELRAGSVKARLLLLEGFF---RSTDLPLLVEHDIDTVVHHESQIEMLEQATLS-KPVT 119

Query: 162 VHIALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFK 221
           V + + D GM R G+    +     A   A +     + +MTHF    ADE      Q +
Sbjct: 120 VWLKV-DSGMHRLGVT-PEQFSAVYARLTACKNVAKPIHLMTHFAC--ADEPDNHYTQVQ 175

Query: 222 ESSTWLMQQANLKREEIT--LHVANSYTALNVPEAQLDMVRPGGVLFG------DLPTNP 273
                 MQ  N    ++     +ANS  AL  P++Q D +RPG  ++G      D   N 
Sbjct: 176 ------MQTFNQLTADLPGFRTLANSAGALYWPKSQGDWIRPGIAMYGVSPVTGDCGANH 229

Query: 274 EYPSIVSFKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGNKAEVL 333
                ++  +R+ ++     +  VGY   +T  +D+ L  + +GY DGYPR       V 
Sbjct: 230 GLIPAMNLVSRLIAVREHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVW 289

Query: 334 INGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELIFPEL 393
           ING+R  +VG  SM+   VD+        G +V+L+G    Q++ V E+  +   I  EL
Sbjct: 290 INGRRVPIVGRVSMDMLTVDLGHDATDQVGDDVLLWG----QALPVEEVAEHIGTIAYEL 345

Query: 394 YT 395
            T
Sbjct: 346 VT 347