Pairwise Alignments

Query, 407 a.a., alanine racemase from Vibrio cholerae E7946 ATCC 55056

Subject, 849 a.a., putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase (RefSeq) from Bacteroides thetaiotaomicron VPI-5482

 Score =  111 bits (277), Expect = 9e-29
 Identities = 91/334 (27%), Positives = 162/334 (48%), Gaps = 16/334 (4%)

Query: 45  LEISLGQFQSNIEQFKSHM-NANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103
           LE++LG   +N+  ++S + +  TK+  ++KA AYG G   +  T+    +  + VA   
Sbjct: 490 LEVNLGAMVANLNHYRSMLRHPETKMICMVKAAAYGAGSYEIAKTLQEHHVDYLAVAVAD 549

Query: 104 EARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKT-LKV 162
           E   +R++G    +I +    L+   +  D  +E  +        L + A++ G T   +
Sbjct: 550 EGSELRKAGITSSII-IMDPELTSFKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 608

Query: 163 HIALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADE----VRAKLA 218
           H+ L D GM R G  +  +        + +Q ++    + +HF   ++ +     R ++ 
Sbjct: 609 HVKL-DTGMHRLGFSV--DEIPLLIRRLKSQNAVIPRSVFSHFVGSDSAQFDFFTRQQIE 665

Query: 219 QFKESSTWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPT-NPEYPS 277
            F++ S  L +  + K   I  H+ N+      P AQ DMVR G  L+G  P  N    +
Sbjct: 666 LFEKGSQELQEAFSHK---ILRHICNTAGIERFPGAQFDMVRLGIGLYGVSPIDNSIINN 722

Query: 278 IVSFKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMG-NKAEVLING 336
           + + KT +  +  +P + TVGY      +R S +A +P+GY+DG  R +G   A  L+NG
Sbjct: 723 VSTLKTTILQIRDVPGEDTVGYSRMGHLTRPSRIAAIPIGYADGLNRHLGRGNAYCLVNG 782

Query: 337 QRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFG 370
           ++A  VG   M+  ++DVT+I     G + V+FG
Sbjct: 783 KKAPYVGNICMDVCMIDVTDI-DCREGDKAVIFG 815