Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  212 bits (540), Expect = 2e-59
 Identities = 120/314 (38%), Positives = 190/314 (60%), Gaps = 15/314 (4%)

Query: 213 KSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAET 272
           + L  + +K+A  D  +LI+GE+GTGKE++A+A HN S R+ AP + ++CA++P+ + E+
Sbjct: 152 QDLFGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIES 211

Query: 273 ELFGHAPGSFNHQQ-GHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEE 331
           ELFGH  G+F     G  G+ E A+GGT+FLDEIGE+    Q +LLR LQ+G  RRVG  
Sbjct: 212 ELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSV 271

Query: 332 HEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFIT 391
               VDVR+IA+T  +L  LA++ +FREDL+YRL+V+ L++PPLRER SDV  + + F+ 
Sbjct: 272 QSQKVDVRLIAATHRDLKTLAKTGQFREDLYYRLHVIALKLPPLRERGSDVLEIAKAFLA 331

Query: 392 KHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRAL-----TEIEGDVLGIEPFH 446
           +   ++G      + D    +  Y WPGN+R+L+N + RA       EI+ ++LGI+   
Sbjct: 332 RQGERMGSDDLHFSRDAEQAIRHYSWPGNVRELENAIERAAILSESPEIDAELLGID-IE 390

Query: 447 LPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQSF-------PSSRKLAKRLNVSHT 499
           L ++D     P  ++ G + +  +  E   L+  FQ F        +  +LA++L +S  
Sbjct: 391 LDELDDDFDEPLGSIRG-IANSNEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGISRK 449

Query: 500 SIANKLRDYGIRKR 513
            +  + +  GI +R
Sbjct: 450 CLWERRQRLGIPRR 463