Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  212 bits (540), Expect = 2e-59
 Identities = 123/310 (39%), Positives = 186/310 (60%), Gaps = 13/310 (4%)

Query: 196 LQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSA 255
           L S+  F   +G S   + L  Q ++LA  + P+L+ GE+GTGKE++A+A H  S+R++ 
Sbjct: 137 LLSDDRFHGMLGRSRVMRGLFDQIRQLARAEGPVLVIGESGTGKELVARAVHAESERANR 196

Query: 256 PFLVLSCASMPDDVAETELFGHAPGSFNH-QQGHKGIFEQANGGTVFLDEIGEMSPHLQI 314
           PFL ++CA +P ++ E+E FGH  G+F    + HKG+F+QA+GGT+FLDEIGEM   LQ 
Sbjct: 197 PFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQADGGTLFLDEIGEMPLPLQA 256

Query: 315 KLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPP 374
           KLLR LQ+GT R VG E E+ VDVR+IA++   L   A    FREDLF+RL    L++PP
Sbjct: 257 KLLRVLQEGTIRPVGAERELTVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPP 316

Query: 375 LRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTE 434
           LR+R  D++ L   F+     + G     L   +L +L +Y +PGN+R+L N + RA+T 
Sbjct: 317 LRDREEDLELLAAGFVAHFAARSGRPVRGLAPAVLAQLRRYPFPGNVRELQNAIERAVTF 376

Query: 435 IEGDVLGIEPFHLP------QVDSVSSAPSINL----DGSLDDIMKEYESQVLDRLFQSF 484
             G  + +E  HLP      + D+  SA +  L    DG L   ++E E + ++ + +  
Sbjct: 377 CHGRSIELE--HLPSRIADYRDDNARSAGAELLAQLSDGPLLPTLEELELRYIEHVLKLV 434

Query: 485 PSSRKLAKRL 494
             +++ A  L
Sbjct: 435 DGNKRRAAAL 444