Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  360 bits (924), Expect = e-104
 Identities = 196/515 (38%), Positives = 313/515 (60%), Gaps = 6/515 (1%)

Query: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEI 58
           MR++V C++R+G+ R++LD+L +  +++   E+  +    IYL+CP++    F  L  + 
Sbjct: 1   MRIKVHCQNRIGILRDILDLLVAYGVNVARGEVGGEHGDAIYLHCPNLINLQFQALRPKF 60

Query: 59  RRIPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREES 118
             I GV  V+++  MP ER + EL +LL  L   VL+I++ GA+  AN AAA L      
Sbjct: 61  EAITGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDMGGAIVAANRAAAQLLGVRVD 120

Query: 119 SMIGQQISALMPVFNFTRWLEGSKSRLRE-DVVLDGLDYVMEIMPVYISSDAKQSTLASA 177
            + G  +S     F+    +  S+SR+    V + G  ++ +I P+    D  ++   + 
Sbjct: 121 EVPGMPLSRYAEDFDLPELVRASQSRINGLRVKVCGDVFLADIAPLQSEHDDSEAMAGAV 180

Query: 178 MMMLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGT 237
           + + RA   G      +  Q   GF+     S    +++ +A+++A LD PLLIEGETGT
Sbjct: 181 LTLHRADRVG-ERIYHVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGT 239

Query: 238 GKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFN--HQQGHKGIFEQA 295
           GKE+LA+ACH  S R  +P + L+CA + + +AE ELFG+ PG+F     +G  G+ E  
Sbjct: 240 GKELLARACHLASPRGQSPLMALNCAGLSESMAEIELFGYDPGAFEGARAEGRLGLLELT 299

Query: 296 NGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESR 355
            GGT+FLD +GE+S  +Q KLLRF+QDG+FRRVG + ++ +DVRV+ ST+ +L++L    
Sbjct: 300 AGGTLFLDGVGELSARMQAKLLRFIQDGSFRRVGSDEDMFLDVRVMCSTQVDLSELCAKG 359

Query: 356 RFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQY 415
            FR+DL++RLNVL+L IPPLR+    ++PL+E F+ +   ++G   P ++   + +L QY
Sbjct: 360 MFRQDLYHRLNVLSLHIPPLRDCLDGLEPLVEHFLDQASRQIGCALPGISPAAIKRLGQY 419

Query: 416 QWPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQ 475
            WPGN+RQL+N++ +A++  +G  +  E   LP          ++L+G L  I+  +E  
Sbjct: 420 HWPGNVRQLENVLFQAVSLCDGGKVQAEHIRLPDYGMRQGLSEVSLEGGLGAIIGRFEKS 479

Query: 476 VLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGI 510
           VL++L+  +PSSR+L KRL VSHT+IANKLRDY +
Sbjct: 480 VLEQLYAQYPSSRQLGKRLGVSHTTIANKLRDYEV 514