Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  334 bits (857), Expect = 4e-96
 Identities = 198/514 (38%), Positives = 310/514 (60%), Gaps = 20/514 (3%)

Query: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEIDVIGIIYLNCPDIDFETFSELMAEIRR 60
           MR+ V   DR+G+T+E+L IL  ++++L  +E+ V   +Y++ P +  +   EL   + R
Sbjct: 1   MRIHVSFIDRVGITQEVLAILGGRNLNLDAVEM-VPPNVYIDAPTLSHQMLEELKDALFR 59

Query: 61  IPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREESSM 120
           + GV+ +  +  +P +R + +L +LL  + D VLA++  G V +AN A  AL  RE +  
Sbjct: 60  VRGVEAITVVDILPGQRRHLQLDALLAAMTDPVLALDSAGHVLLANPALIALIGREPA-- 117

Query: 121 IGQQISALM--PVFNFTRWLEGSKSRLREDVVLDGLDYVMEIMPVYISSDAKQSTLASAM 178
            G+ I  L   P  +      G +  LRE + L+G   +++  P+         T A A+
Sbjct: 118 -GESIGELFSDPSLHVALLENGFRLPLRE-ITLNGEALLLDATPI---------TEAGAL 166

Query: 179 MMLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTG 238
           + L   +      + +      GF+  +G S   ++L ++A+++A LD PLLI+GETGTG
Sbjct: 167 ITLYLPSRIGERLSALHHDHAEGFDALLGDSAAIRTLKARAQRVAALDAPLLIQGETGTG 226

Query: 239 KEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQ--GHKGIFEQAN 296
           KE++A+ACH  S R   PFL L+CA++P+++AE+ELFG+APG+F   Q  G  G+ E AN
Sbjct: 227 KELVARACHASSARHGEPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELAN 286

Query: 297 GGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRR 356
            G+VFLDEIGEMSP+LQ KLLRFL DG+FRRVG + E+ V+VR++++T  +L  +     
Sbjct: 287 QGSVFLDEIGEMSPYLQAKLLRFLNDGSFRRVGGDREVRVNVRILSATHRDLEKMVSEGT 346

Query: 357 FREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQ 416
           FREDLFYRLNVL L +PPLRER  D+  L   F+ + C ++     +L       L   +
Sbjct: 347 FREDLFYRLNVLNLEVPPLRERGQDILLLARYFMEQACAQIQRPVCRLAPGTYPALLGNR 406

Query: 417 WPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQV 476
           WPGN+RQL N++ RA    E   + I    +    +V+      +D SL++ ++ +E  +
Sbjct: 407 WPGNVRQLQNVIFRAAAICEHTQVDIGDLDIAGT-AVARQNDSPID-SLENAVEAFERNL 464

Query: 477 LDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGI 510
           L++L+  +PS+R+LA RL+ SHT+IA++LR YGI
Sbjct: 465 LEKLYADYPSTRQLANRLHTSHTAIAHRLRKYGI 498