Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (536), Expect = 7e-59
 Identities = 128/345 (37%), Positives = 201/345 (58%), Gaps = 19/345 (5%)

Query: 181 LRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKE 240
           L  AN  LT   ++ L+        +G  +  K +M+Q + +A L   +LI GETG GKE
Sbjct: 166 LLRANQALTQQNRL-LKQAFNPCGVIGADSGLKRVMTQVEAIAKLHTSVLILGETGCGKE 224

Query: 241 MLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGT 299
           ++A A H +S R+  PF+ ++C ++P+ + ++ELFG+  G+F   +  K G FEQANGGT
Sbjct: 225 VIANAVHCKSQRADKPFIKVNCGAIPESLIDSELFGYEKGAFTGAEHRKAGFFEQANGGT 284

Query: 300 VFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFRE 359
           +FLDEIGE+   +Q++LLR LQ+GT  RVG    I++D+RVIA+T  NL  + + + FRE
Sbjct: 285 IFLDEIGELPLSVQVRLLRVLQNGTITRVGGFDAINLDIRVIAATHRNLQAMVKKQTFRE 344

Query: 360 DLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLK-PKLTDDLLDKLSQYQWP 418
           DL+YRL V  + IP LR+R SD+  L++ FI     K  + K P+++ + LD L+ Y WP
Sbjct: 345 DLWYRLAVFPIEIPSLRQRRSDIPLLVQHFIEVLAAKFNLDKLPRVSSEQLDSLNHYHWP 404

Query: 419 GNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPS-----INLDGS--------L 465
           GN+R+L N++ RA+ E     L    F+L QVD V  A S     I +D S        L
Sbjct: 405 GNVRELINVLERAMIEAPEGPLN---FNLTQVDKVEPAASGKHETIIIDPSHASDKLVPL 461

Query: 466 DDIMKEYESQVLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGI 510
           D ++ +Y +  +             A+ L+++  ++ +K++  G+
Sbjct: 462 DVMVSKYIAHAMRITGGKLYGPGGAAEMLDINPNTLRSKMKKLGL 506