Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., transcriptional regulator, TyrR (RefSeq) from Shewanella loihica PV-4

 Score =  405 bits (1042), Expect = e-117
 Identities = 217/515 (42%), Positives = 327/515 (63%), Gaps = 6/515 (1%)

Query: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEIDVIGIIYLNCPDIDFETFSELMAEIRR 60
           MRLEV C DR+GL +++L IL    I+L  I+    G +YL   +++F+  SEL+  IR+
Sbjct: 1   MRLEVSCIDRVGLAKDILVILEGYGINLIAIDASNQGFLYLQFAEVNFDVLSELLPLIRK 60

Query: 61  IPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREESSM 120
           + GV DVR + FMP E+ +  L +LL  LPD+V +I++KG + + N +A    N  E  +
Sbjct: 61  VEGVHDVRTVSFMPSEQEHYALKTLLKTLPDSVFSIDVKGRIRIVNESALMTVNMGEHEV 120

Query: 121 IGQQISALMPVFNFTRWLEGSKSRLREDVVLDGL-DYVMEIMPVYISSDAKQSTLASAMM 179
           + + ++  +  FNF RWL       +   V  G  +Y+ E++P+Y+  +  ++ LA A++
Sbjct: 121 LDEPLNHWVQGFNFNRWLSEPLVLAQATRVNIGQSEYLAEMLPIYLPDENDKTILAGAVV 180

Query: 180 MLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGK 239
            L++  A +            GFE+ + VS++ K ++ QA+++A LD PLLI GETGTGK
Sbjct: 181 SLKSP-ARVGKQFNALQNQTTGFENVLAVSDKMKEVLVQARRMAQLDAPLLITGETGTGK 239

Query: 240 EMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQGHKGIFEQANGGT 299
           E++A+ACH+ S R   PF+ ++CA+MPD  AE ELFG+  G    +   +G FE+A GGT
Sbjct: 240 ELMARACHDASMRREHPFIAINCAAMPDSAAEEELFGYVSGG---EVVKRGFFEEAKGGT 296

Query: 300 VFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFRE 359
           VFLDEI EMS   Q+KLLR LQDGTFRRVG + E+  DVR+I ST+ NLA+L ++  FRE
Sbjct: 297 VFLDEIAEMSKAAQVKLLRLLQDGTFRRVGGDVEVRSDVRIICSTQKNLAELCQTGEFRE 356

Query: 360 DLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPG 419
           DL+YR++VL+  +P LRER  DV PL E+F+  +  +L +   +++    + L  Y WPG
Sbjct: 357 DLYYRIHVLSFHMPSLRERKVDVIPLTEMFLEHYSQQLSIPIRRISAPCREHLLGYAWPG 416

Query: 420 NMRQLDNMVLRALTEIEGDV-LGIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLD 478
           N+RQL N + RA++  +G   L ++   LP             +GSLD  MK++E+ +L 
Sbjct: 417 NVRQLKNAIFRAVSMWDGSAELTVDQLKLPSYAEGFGYFDHQFEGSLDQAMKQFEASLLR 476

Query: 479 RLFQSFPSSRKLAKRLNVSHTSIANKLRDYGIRKR 513
           RL+ ++PS+R+LAK+L VSHT+IANKLR+Y I K+
Sbjct: 477 RLYPAYPSTRQLAKKLGVSHTAIANKLREYKISKQ 511